Information for 7-GGGTCAGAGA (Motif 13)

C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A
Reverse Opposite:
C A G T A G T C A G C T A G T C A C G T A T C G G T C A A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.832
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif313.3
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets47.8 +/- 23.2bp
Average Position of motif in Background47.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GGGTCAGAGA
CGCGCCGGGTCACGTA
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGTCAGAGA
AGGTCA----
C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGTCAGAGA
AGRGGTCA----
A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGTCAGAGA---
AGGGGTCAGAGGTCA
A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GGGTCAGAGA-
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GGGTCAGAGA
AGAGCGGGGTCAAGTA
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GGGTCAGAGA-
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGTCAGAGA
TRAGGTCA----
A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGTCAGAGA---
GAGGTCAAAGGTCA
A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A A C G T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGGTCAGAGA-
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G C A G T A T G C C G T A A C T G C T G A T C A G G T C A A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A