p-value: | 1e-10 |
log p-value: | -2.487e+01 |
Information Content per bp: | 1.832 |
Number of Target Sequences with motif | 26.0 |
Percentage of Target Sequences with motif | 3.46% |
Number of Background Sequences with motif | 313.3 |
Percentage of Background Sequences with motif | 0.65% |
Average Position of motif in Targets | 47.8 +/- 23.2bp |
Average Position of motif in Background | 47.7 +/- 29.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGTCAGAGA CGCGCCGGGTCACGTA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGTCAGAGA AGGTCA---- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGTCAGAGA AGRGGTCA---- |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGTCAGAGA--- AGGGGTCAGAGGTCA |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGGTCAGAGA- NTNNNGGGGTCANGNNN |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 6 |
Score: | 0.69 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGTCAGAGA AGAGCGGGGTCAAGTA |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGTCAGAGA- GGCGAGGGGTCAAGGGC |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGTCAGAGA TRAGGTCA---- |
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TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGTCAGAGA--- GAGGTCAAAGGTCA |
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PB0030.1_Hnf4a_1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGTCAGAGA- CTCCAGGGGTCAATTGA |
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