Information for 6-TGGCCWTGGGTTCWTT (Motif 10)

A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
Reverse Opposite:
T G C A T C G A C G A T C T A G C G T A G T C A G T A C G T A C A G T C G T C A C G T A A C T G T C A G G T A C G T A C C T G A
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.738
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.3 +/- 25.2bp
Average Position of motif in Background49.7 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCWTGGGTTCWTT
BNTGDCCTTG--------
 A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCWTGGGTTCWTT
TGACCTTGAN------
 A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCCWTGGGTTCWTT
TGACCTTGAV------
 A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCWTGGGTTCWTT
GCTGACCTTGAACTN---
 A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCCWTGGGTTCWTT
TTGCCATGGCAACN--
 A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGCCWTGGGTTCWTT
---CCATGTGCTT---
 A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCWTGGGTTCWTT
GTTGCCATGGNAAC---
 A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCCWTGGGTTCWTT
TTGCCATGGCAACC--
 A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCWTGGGTTCWTT
NNNNATGACCTTGANTN----
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCWTGGGTTCWTT
KGTTGCCATGGCAAC---
 A C G T A C G T A G C T A C T G A C T G A G T C A G T C C G A T A C G T A C T G A C T G A C T G C A G T G C A T A G T C G C T A A G C T A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T A C G T A C G T