Information for 1-TGRMCTTTGVHCTYTG (Motif 1)

G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
Reverse Opposite:
T A G C G C T A T C G A C T G A C T A G C A T G A G C T A G T C G T C A T C G A C T G A C A T G C A T G A G C T G A T C C G T A
p-value:1e-112
log p-value:-2.582e+02
Information Content per bp:1.532
Number of Target Sequences with motif228.0
Percentage of Target Sequences with motif30.32%
Number of Background Sequences with motif2321.8
Percentage of Background Sequences with motif4.85%
Average Position of motif in Targets51.6 +/- 23.2bp
Average Position of motif in Background49.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGGACTTTGNNCTNTG
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGGACTTTGNNCTCN-
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTTTGACCTC--
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTTTGACCTN--
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:5
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGRMCTTTGVHCTYTG
GTTGACCTTTGACCTTT-
 A C G T A C G T G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTTTGACCCC--
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTTTGACCCC--
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTTTGCCCTA--
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTTTGACCCC--
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGRMCTTTGVHCTYTG
TGACCTCTGACCCCN-
 G C A T C T A G T C G A G T A C G T A C A G C T A G C T C A G T T A C G T C G A G T A C G A T C G A C T A G C T C G A T A T C G
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T