Information for 10-DTGGCTGVCAGBCAHT (Motif 21)

C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
Reverse Opposite:
C T G A C T G A A C G T A C T G T A C G A G T C A C G T A C T G A T G C A G T C C G T A A C T G A T G C A G T C C T G A G C T A
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.805
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 22.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:DTGGCTGVCAGBCAHT
-TGGCAGNCTGCCAG-
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:DTGGCTGVCAGBCAHT
--GSCTGTCACTCA--
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:DTGGCTGVCAGBCAHT
---SCTGTCAVTCAV-
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:DTGGCTGVCAGBCAHT
--VGCTGWCAVB----
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:DTGGCTGVCAGBCAHT
---NCTGTCAATCAN-
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:DTGGCTGVCAGBCAHT
--AGGTGNCAGACAG-
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:DTGGCTGVCAGBCAHT
--AGGTGHCAGACA--
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-DTGGCTGVCAGBCAHT
CTTGGCANNNTGCCAA-
 A C G T C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:DTGGCTGVCAGBCAHT
TTGGCATGGTGCCA--
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:DTGGCTGVCAGBCAHT
---RHTGWCAR-----
 C G A T A G C T A C T G A T C G A G T C A C G T A C T G T A C G A G T C C G T A A C T G A T G C A G T C C G T A G A C T A G C T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T