Information for 6-TCAVCTBAAAGAABCH (Motif 10)

A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
Reverse Opposite:
C G A T C T A G T C A G A G C T A C G T G T A C A G C T C G A T A C G T T G A C C G T A T C A G A G T C A C G T A T C G C G T A
p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.742
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.6 +/- 23.8bp
Average Position of motif in Background52.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCAVCTBAAAGAABCH
--ACATCAAAGG----
 A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCAVCTBAAAGAABCH
AAAGATCAAAGGAA--
 A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAVCTBAAAGAABCH
--ACATCAAAGGNA--
 A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCAVCTBAAAGAABCH
TGAACTCNATGAACTC
 A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCAVCTBAAAGAABCH
TATAGATCAAAGGAAAA
 A C G T A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAVCTBAAAGAABCH
--ACWTCAAAGG----
 A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCAVCTBAAAGAABCH
TATAGATCAAAGGAAAA
 A C G T A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAVCTBAAAGAABCH
NANAGATCAAAGGGNNN
 A C G T A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAVCTBAAAGAABCH
NNNAGATCAAAGGANNN
 A C G T A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCAVCTBAAAGAABCH
-TAATTCAATGAAGTG
 A C G T A T G C C G T A T C A G A G T C C G A T A C T G C G T A C G T A C T G A A C T G C G T A C T G A A G T C G A T C G C T A
A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G