Information for 9-CATGCCATGGCAT (Motif 14)

A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T
Reverse Opposite:
G T C A A G C T A C T G A T G C A G T C T C G A C G A T T A C G A T C G G T A C G T C A C A G T A T C G
p-value:1e-5
log p-value:-1.325e+01
Information Content per bp:1.700
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif65.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.6 +/- 21.5bp
Average Position of motif in Background53.3 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CATGCCATGGCAT
ACATGCCCGGGCAT
 A C G T A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

TP53/MA0106.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATGCCATGGCAT---
GACATGCCCGGGCATGTT
 A C G T A C G T A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T A C G T A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATGCCATGGCAT--
-TTGCCATGGCAACC
 A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T A C G T A C G T
A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CATGCCATGGCAT--
-TTGCCATGGCAACN
 A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T A C G T A C G T
A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATGCCATGGCAT--
-ATGCCACGTCATCA
 A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T A C G T A C G T
A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CATGCCATGGCAT---
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CATGCCATGGCAT---
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATGCCATGGCAT
-TTGCCAAG----
 A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATGCCATGGCAT
CGTGCCAAG----
 A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATGCCATGGCAT
-ATGCCAACC---
 A T G C G T C A A C G T A C T G A T G C A T G C C G T A A C G T T C A G T A C G T G A C T C G A C A G T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T