Information for 8-TGCACTGCAT (Motif 13)

A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T
Reverse Opposite:
G T C A C A G T A C T G G A T C G C T A C T A G C A G T T A C G G T A C T C G A
p-value:1e-7
log p-value:-1.681e+01
Information Content per bp:1.665
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif852.0
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets45.1 +/- 27.9bp
Average Position of motif in Background49.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---TGCACTGCAT----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCACTGCAT--
GGGATTGCATNN
 A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-11
Orientation:reverse strand
Alignment:-----------TGCACTGCAT
TGGCCANNNNNGGAACTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCACTGCAT----
GAGCACAGCAGGACA
 A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TGCACTGCAT-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCACTGCAT
NSCACTYVAV
 A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCACTGCAT----
CCACACAGCAGGAGA
 A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCACTGCAT----
CCACACAGCAGGAGA
 A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCACTGCAT-
-DCTCAGCAGG
 A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGCACTGCAT--
NANTTCATTGAATTA
 A C G T A C G T A C G T A G C T C A T G A T G C G T C A G A T C C G A T C T A G T G A C G T C A C A G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A