Information for 4-WGGCCACCAGRGGGCG (Motif 4)

G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
Reverse Opposite:
G A T C T A C G A T G C A G T C G T A C A G T C A G T C A C G T C T A G A C T G A C G T A T C G A T C G A G T C G T A C C G T A
p-value:1e-15
log p-value:-3.512e+01
Information Content per bp:1.710
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.4 +/- 28.4bp
Average Position of motif in Background41.5 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:WGGCCACCAGRGGGCG---
TGGCCACCAGGGGGCGCTA
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG----
TGGCCACCAGGTGGCACTNT
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG------
--GCCASCAGGGGGCGCYVNNG
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG
-----AACAGATGGC-
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG
-NCCCCCCCGGGGGGN
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG-----
----NNNAAGGGGGCGGGNNN
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG
--CCCCCCCGGGGGNN
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG
-ACCCCCCCGGGGGGN
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WGGCCACCAGRGGGCG
-----AACAGATGGT-
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WGGCCACCAGRGGGCG
GGGGCCCAAGGGGG--
 G C A T C A T G C T A G A T G C A T G C T C G A G T A C G A T C C G T A A C T G C T A G A C T G A C T G A T C G A T G C C T A G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T