Information for 7-CTCCGTGATT (Motif 24)

A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T A G T C C G T A G A T C C T A G A C T G C G T A C T A G
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.864
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif91.1
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets46.5 +/- 27.8bp
Average Position of motif in Background55.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTCCGTGATT--
--CNGTGATTTN
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCCGTGATT-
-GCAGTGATTT
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCCGTGATT
--NCGTGACN
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGATT-
TGCTGTGATTT
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCCGTGATT--
----TTGATTGN
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTGATT
GCTCCG-----
 A C G T A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGATT-------
TNNNATGATTTCNNCNN
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGATT
TTGCGTGCVA
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTGATT
GGGTACGTGC--
 A C G T A C G T A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCCGTGATT-
-GCTGTGGTTT
 A G T C A C G T A G T C A G T C C T A G A C G T A C T G T G C A A G C T A C G T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T