Information for 12-CCTCCAAAAGTACTTT (Motif 22)

A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 21.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCTCCAAAAGTACTTT---
---CTTTAAGTACTTAATG
 A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTCCAAAAGTACTTT----
---TACTAAGTACTTAAATG
 A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTCCAAAAGTACTTT---
--ACTCCAAGTACTTGGAA
 A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTCCAAAAGTACTTT----
---TTTTAAGTACTTAAATT
 A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CCTCCAAAAGTACTTT-
-------AAGCACTTAA
 A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAAAAGTACTTT------
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCAAAAGTACTTT
TTTTCCCGCCAAAA-------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCTCCAAAAGTACTTT----
----NNATTGGACTTTNGNN
 A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF410/MA0752.1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CCTCCAAAAGTACTTT
TCCATCCCATAATACTC-
 A C G T A C G T A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----CCTCCAAAAGTACTTT
AAGCCCCCCAAAAAT-----
 A C G T A C G T A C G T A C G T A G T C G T A C C G A T A G T C G T A C C G T A G T C A C G T A C G T A A C T G C A G T C G T A A G T C A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T