Information for 5-AGYCCCACGTGCAGAC (Motif 10)

C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C
Reverse Opposite:
A T C G A C G T A G T C C G A T A C T G A G T C C G T A G T A C A T C G A C G T C A T G A C T G A T C G T C G A A G T C A C G T
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.690
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif295.4
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets54.2 +/- 23.9bp
Average Position of motif in Background52.1 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:AGYCCCACGTGCAGAC----
----------CCAGACRSVB
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGYCCCACGTGCAGAC
---GCCACGTG-----
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C
A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.58
Offset:9
Orientation:forward strand
Alignment:AGYCCCACGTGCAGAC---
---------TGCTGACTCA
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:AGYCCCACGTGCAGAC--
----------CCAGACAG
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGYCCCACGTGCAGAC
---NCCACGTG-----
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C
A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:AGYCCCACGTGCAGAC--
----------BCAGACWA
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Id2/MA0617.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGYCCCACGTGCAGAC
----TCACGTGC----
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C
A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGYCCCACGTGCAGAC-
ATCCACAGGTGCGAAAA
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGYCCCACGTGCAGAC
----CCACGTGGNN--
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGYCCCACGTGCAGAC
--NNCCACGTGG----
 C G T A T A C G A G C T T A G C A G T C G T A C G T C A T A G C A C T G C G A T A C T G A G T C C G T A A C T G T G C A A T G C
A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T