Information for 8-GGCCATCTTCCTGTGT (Motif 9)

A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
Reverse Opposite:
G T C A A T G C G T C A A T G C C G T A A C T G A C T G C G T A C G T A A T C G C G T A C G A T A C T G A T C G A G T C A G T C
p-value:1e-13
log p-value:-3.075e+01
Information Content per bp:1.783
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 22.8bp
Average Position of motif in Background76.1 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATCTTCCTGTGT
GCNGCCATCTTG------
 A C G T A C G T A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGCCATCTTCCTGTGT
GARTGGTCATCGCCC-----
 A C G T A C G T A C G T A C G T A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCCATCTTCCTGTGT
GGCCATTAAC------
 A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGCCATCTTCCTGTGT
------CTTCCGGT--
 A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCCATCTTCCTGTGT
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCCATCTTCCTGTGT
-GCCATCTGTT-----
 A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCATCTTCCTGTGT
GAGCCCTTGTCCCTAA--
 A C G T A C G T A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGCCATCTTCCTGTGT
-----ACTTCCTGTT-
 A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATCTTCCTGTGT
GCCGCCATCTTG------
 A C G T A C G T A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCCATCTTCCTGTGT
CTTGGCANNNTGCCAA---
 A C G T A C G T A C G T A C T G C T A G A T G C A G T C G C T A A C G T A T G C C G A T G A C T A G T C A G T C G A C T A T C G A C G T A T C G A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T A C G T A C G T