Information for 4-CTGCACSGGGCAG (Motif 5)

A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G T C A G T C A T G C A T G C A T C G A G C T C T A G A T G C G T C A A C T G
p-value:1e-19
log p-value:-4.427e+01
Information Content per bp:1.795
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif203.3
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets38.3 +/- 18.6bp
Average Position of motif in Background51.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTGCACSGGGCAG
----TNNGGGCAG
 A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGCACSGGGCAG-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGCACSGGGCAG
----NGTGGGCAT
 A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCACSGGGCAG---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTGCACSGGGCAG--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGCACSGGGCAG---
TTATCTGNNNNCNNCAGCNG
 A C G T A C G T A C G T A C G T A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGCACSGGGCAG-------
----NNNTGGCAGTTGGTNN
 A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGCACSGGGCAG
TCACCTCTGGGCAG
 A C G T A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

ELF5/MA0136.2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGCACSGGGCAG--
----ACCCGGAAGTA
 A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGCACSGGGCAG-
----ANCCGGAAGT
 A G T C C A G T A T C G A G T C C T G A A T G C T A C G A T C G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T