Information for 11-AACTTTTGTC (Motif 26)

C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A A G T C C G T A C G T A C G T A T C G A A C T G A C G T A C G T
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.919
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif38.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.9 +/- 24.1bp
Average Position of motif in Background45.3 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AACTTTTGTC
--CCWTTGTY
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AACTTTTGTC--
--CCTTTGTTTT
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AACTTTTGTC
--CCTTTGTT
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACTTTTGTC
AACATATGTC
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Rarg/MA0859.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AACTTTTGTC---
TTGACCTTTTGACCTT
 A C G T A C G T A C G T C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AACTTTTGTC-----
ANTCCTTTGTCTNNNN
 A C G T C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AACTTTTGTC-
-NCCATTGTTY
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACTTTTGTC--
--CCWTTGTYYB
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACTTTTGTC--
--CCATTGTTNY
 C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Rarb/MA0857.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AACTTTTGTC----
TGACCTTTTGACCTTT
 A C G T A C G T C G T A C G T A A G T C A G C T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T