Information for 7-GARCTTTCCTTCA (Motif 4)

A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
Reverse Opposite:
C G A T A C T G C T G A C T G A A T C G C T A G C T G A T C G A C G T A C T A G G A T C C A G T G T A C
p-value:1e-10
log p-value:-2.346e+01
Information Content per bp:1.735
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets48.6 +/- 29.0bp
Average Position of motif in Background56.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GARCTTTCCTTCA
NNACTTGCCTT--
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GARCTTTCCTTCA
-CACATTCCAT--
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GARCTTTCCTTCA
--ATTTTCCATT-
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GARCTTTCCTTCA
--ACATTCCA---
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GARCTTTCCTTCA----
-NNCATTCATTCATNNN
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GARCTTTCCTTCA
--ATTTTCCATT-
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GARCTTTCCTTCA
GGGGATTTCC----
 A C G T A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GARCTTTCCTTCA
-CACATTCCAT--
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GARCTTTCCTTCA
TGACCTTTGCCCCA
 A C G T A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GARCTTTCCTTCA
---ATTTCCTGTN
 A C T G G C T A C T A G A G T C G A C T A C G T A G C T A G T C A T G C A G C T A G C T A G T C C G T A
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G