Information for 10-TGAAATAAAAAGA (Motif 9)

C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C G C A T A C G T C A G T A C G T A C G T C G T A A G C T A C G T C G A T A G T C C G T A
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.842
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.2 +/- 22.3bp
Average Position of motif in Background50.2 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGAAATAAAAAGA-
AACAAACAACAAGAG
 A C G T C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAAATAAAAAGA-
TAGGTAATAAAATTCA
 A C G T A C G T C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGAAATAAAAAGA
TACTGGAAAAAAAA---
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAAATAAAAAGA--
AATGCAATAAAATTTAT
 A C G T A C G T C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGAAATAAAAAGA
-GTCATAAAAN--
 C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAAATAAAAAGA
GGTAATAAAAA--
 C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAAATAAAAAGA
-GCAATAAAA---
 C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGAAATAAAAAGA
-GCAATAAAAA--
 C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAAATAAAAAGA
AAGCCATAAAA---
 A C G T C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAAATAAAAAGA--
AAAAATAACAAACGG
 C G A T A C T G C G T A C G T A C T G A A C G T C G T A C G T A G T C A G T C A C G T A A C T G C G T A A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G