Information for 7-GTTTTGCATC (Motif 9)

C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C
Reverse Opposite:
A T C G C T G A C G A T A C T G A G T C G C T A T G C A C G T A C G T A G A T C
p-value:1e-9
log p-value:-2.240e+01
Information Content per bp:1.849
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif78.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.9 +/- 34.2bp
Average Position of motif in Background51.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTTTTGCATC-
-ATTTGCATAA
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTTTTGCATC-
TTCATTTGCATAT
 A C G T A C G T C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTGCATC
BTVATTWGCATA
 A C G T A C G T C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTTTTGCATC--
--ATTGCATCAK
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTTGCATC-
-ATTTGCATAT
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

ATF4/MA0833.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTTGCATC----
-TATTGCATCATCC
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTTTTGCATC---
---TTGCAACATN
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTTTTGCATC--
--ATTGCATCAT
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T A C G T
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTTGCATC
-ATTTGCATA
 C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTGCATC--
ANATTTTTGCAANTN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C G A T A C T G A G T C G C T A A G C T A T G C A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G