Information for 6-CTAAGGGAAG (Motif 11)

A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G
Reverse Opposite:
A T G C A G C T A C G T A G T C A G T C G T A C A G C T C A G T T G C A A T C G
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.847
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif128.4
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets56.4 +/- 22.2bp
Average Position of motif in Background50.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAAGGGAAG
-TNNGGGCAG
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAAGGGAAG
CTAATKGV--
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTAAGGGAAG-
-----NGAAGC
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTAAGGGAAG---
--AAGGCAAGTGT
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTAAGGGAAG
--ACCGGAAG
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G
A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGGAAG---
TTAAGAGGAAGTTA
 A C G T A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTAAGGGAAG
--AGAGGAA-
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGGGAAG
GCCTCAGGGCAT
 A C G T A C G T A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTAAGGGAAG-
-AVCAGGAAGT
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G A C G T
A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTAAGGGAAG--
--AGAGGAAGTG
 A T G C A C G T G T C A C T G A A C T G A C T G A C T G C G T A C T G A A T C G A C G T A C G T
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G