Information for 5-SARACTGKCCWGG (Motif 5)

A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A C T A G C T A G G T A C A G T C G T C A A C T G A C G T A G C T A C G T A T C G
p-value:1e-14
log p-value:-3.365e+01
Information Content per bp:1.868
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.6 +/- 18.8bp
Average Position of motif in Background52.1 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SARACTGKCCWGG
-NNACTTGCCTT-
 A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:SARACTGKCCWGG
CCAACTGCCA---
 A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---SARACTGKCCWGG
CGACCAACTGCCGTG-
 A C G T A C G T A C G T A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---SARACTGKCCWGG
CGACCAACTGCCATGC
 A C G T A C G T A C G T A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SARACTGKCCWGG
CCAACTGCCA---
 A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SARACTGKCCWGG-
TGACANARRCCAGRC
 A C G T A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SARACTGKCCWGG
NHAACBGYYV---
 A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:SARACTGKCCWGG--
-----TGCCCAGNHW
 A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---SARACTGKCCWGG
GVACAGNMTGTYCTB-
 A C G T A C G T A C G T A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---SARACTGKCCWGG
GRACAGWMTGTYCTB-
 A C G T A C G T A C G T A T G C C G T A C T G A C G T A A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G C T A G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T