Information for 18-CGCGGAACCAAAG (Motif 21)

T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
Reverse Opposite:
A T G C A C G T A C G T C G A T A C T G A T C G G A C T A C G T A G T C T A G C A T C G A G T C A T C G
p-value:1e-6
log p-value:-1.584e+01
Information Content per bp:1.659
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif98.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets47.8 +/- 29.4bp
Average Position of motif in Background54.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCGGAACCAAAG
GGGCGGGACC----
 A C G T T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCGGAACCAAAG
AGGACCCGGAAGTAA--
 A C G T A C G T A C G T A C G T T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGCGGAACCAAAG-
----AAACCACAGC
 T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCGGAACCAAAG
RCCGGAARYN---
 T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGCGGAACCAAAG
---NAAACCACAG
 T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCGGAACCAAAG--
----AAACCACAGAN
 T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCGGAACCAAAG-
----AAAACAAAGG
 T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCGGAACCAAAG
DCCGGAARYN---
 T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCGGAACCAAAG
AACAAGGAAGTAA--
 A C G T A C G T T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGCGGAACCAAAG
ACCCGGAAGTA---
 A C G T T A G C T C A G T A G C A C T G T C A G T G C A C T G A T A G C G T A C G C T A T C G A G T C A T A C G
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T