Information for 3-AATATGGCGG (Motif 2)

C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G
Reverse Opposite:
A G T C G A T C C T A G T A G C A T G C G C T A A G C T C G T A G A C T G A C T
p-value:1e-20
log p-value:-4.691e+01
Information Content per bp:1.682
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif534.6
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets53.0 +/- 28.6bp
Average Position of motif in Background53.9 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-
CAAGATGGCGGC
 A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-
CAAGATGGCGGC
 A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:AATATGGCGG--
-TAATGGCGGNC
 C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATATGGCGG
ACCATATGGC--
 A C G T A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATATGGCGG
ACCATATGGT--
 A C G T A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATATGGCGG------
AAAATGGCGCCATTTT
 C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-------
AAAAATGGCGCCATTTTT
 A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AATATGGCGG
---TTGGCA-
 C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATATGGCGG
AACATATGTT--
 A C G T A C G T C T G A C T G A G C A T T C G A C G A T A T C G A T C G G A T C C T A G T C A G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T