Information for 9-WAWGTACCCG (Motif 12)

C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G
Reverse Opposite:
A G T C A C T G C T A G A C T G C A G T G T C A A T G C C G T A C A G T G C T A
p-value:1e-10
log p-value:-2.444e+01
Information Content per bp:1.704
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 24.0bp
Average Position of motif in Background33.7 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--WAWGTACCCG-----
NNNNGGTACCCCCCANN
 A C G T A C G T C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---WAWGTACCCG----
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:WAWGTACCCG----
---GTACCCGCATN
 C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:WAWGTACCCG
----TCCCCA
 C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:WAWGTACCCG-
AATGTATCAAT
 C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WAWGTACCCG-----
GGGTGTGCCCAAAAGG
 A C G T C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PH0117.1_Nkx3-1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----WAWGTACCCG---
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:WAWGTACCCG-
-CTGTTCCTGG
 C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:WAWGTACCCG--
---ATGCCCACC
 C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WAWGTACCCG
TTAAGTGCTT-
 A C G T C G A T G T C A G C A T A T C G A C G T G T C A G T A C A G T C A G T C T C A G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T