Information for 3-TCCGACTAGA (Motif 4)

C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
Reverse Opposite:
A G C T A G T C G A C T G T C A A C T G A G C T A T G C C A T G C A T G G C T A
p-value:1e-12
log p-value:-2.884e+01
Information Content per bp:1.701
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif235.9
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets47.9 +/- 31.2bp
Average Position of motif in Background47.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCGACTAGA--
--CGTCTAGACA
 C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A A C G T A C G T
A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCGACTAGA--
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCCGACTAGA
-CTGTCTGG-
 C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCCGACTAGA
NACTTCCGGT----
 A C G T A C G T A C G T A C G T C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCCGACTAGA
BCAGACWA--
 C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCCGACTAGA-
--CCACTTGAA
 C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCCGACTAGA
NRYTTCCGGY----
 A C G T A C G T A C G T A C G T C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCCGACTAGA
NRYTTCCGGH----
 A C G T A C G T A C G T A C G T C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCCGACTAGA
HACTTCCGGY----
 A C G T A C G T A C G T A C G T C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A
G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCCGACTAGA----
TAAGCCACTTGAAATT
 A C G T A C G T C G A T G T A C G T A C A T C G T C G A T G A C C A G T C T G A A C T G T C G A A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T