Information for 12-TAGAGAGAAATAA (Motif 21)

C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A
Reverse Opposite:
A G C T C G A T C G T A A C G T A C G T C G A T A G T C A C G T A G T C A C G T A G T C A C G T G C T A
p-value:1e-7
log p-value:-1.645e+01
Information Content per bp:1.820
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif38.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.6 +/- 18.4bp
Average Position of motif in Background53.7 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGAAATAA---
GTTAAAAAAAAAAATTA
 A C G T C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGAAATAA
NTTNAGAACAATTA
 A C G T C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAGAGAGAAATAA---
TTTAGAACAATAAAAT
 C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGAAATAA--
AAACAGACAAAGGAAT
 A C G T C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TAGAGAGAAATAA--
---AAACAAACATTC
 C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAGAGAGAAATAA
TACTGGAAAAAAAA--
 A C G T A C G T A C G T C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAGAGAGAAATAA--
-AAATAAGAAAAAAC
 C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T A C G T
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGAAATAA
GAAAGTGAAAGT-
 C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TAGAGAGAAATAA-
--GCTAAAAATAGC
 C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T
A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

LMX1B/MA0703.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TAGAGAGAAATAA-
------TTAATTAA
 C A G T G T C A A C T G C G T A C T A G C G T A T C A G C G T A C G T A C G T A C G A T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A