Information for 3-CAAGATGGCG (Motif 4)

G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G
Reverse Opposite:
G T A C A T C G A T G C G A T C G T C A A G C T A G T C C G A T A G C T C T A G
p-value:1e-22
log p-value:-5.154e+01
Information Content per bp:1.667
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.54%
Number of Background Sequences with motif784.3
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets51.1 +/- 24.8bp
Average Position of motif in Background53.0 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCG--
CAAGATGGCGGC
 G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCG--
CAAGATGGCGGC
 G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CAAGATGGCG---
--TAATGGCGGNC
 G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATGGCG
AACAGATGGC-
 A C G T G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAAGATGGCG---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAGATGGCG-------
-AAAATGGCGCCATTTT
 G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAGATGGCG-------
NAGANTGGCGGGGNGNA
 G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCG--------
AAAAATGGCGCCATTTTT
 G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CAAGATGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATGGCG
AACAGATGGT-
 A C G T G A T C T C G A G C T A T C A G T C G A C A G T C A T G T A C G T A G C C A T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T