Information for 12-AGTCTGAGGC (Motif 15)

C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C
Reverse Opposite:
T A C G A G T C A G T C A C G T A T G C G T C A A C T G C G T A T G A C G C A T
p-value:1e-10
log p-value:-2.321e+01
Information Content per bp:1.827
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif187.0
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets55.4 +/- 23.7bp
Average Position of motif in Background49.8 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGTCTGAGGC-
TGCCTGAGGCN
 C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGTCTGAGGC-
AGCCTCAGGCA
 C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTCTGAGGC-
NGCCTGAGGCN
 C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGTCTGAGGC---
ATTGCCTGAGGCAAT
 A C G T A C G T C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGGC
TWGTCTGV---
 A C G T C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGTCTGAGGC---
ATTGCCTCAGGCAAT
 A C G T A C G T C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTCTGAGGC---
-SCCTSAGGSCAW
 C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTCTGAGGC
ATGCCCTGAGGC
 A C G T A C G T C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGAGGC
CTGTCTGG---
 A C G T C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGTCTGAGGC
VBSYGTCTGG---
 A C G T A C G T A C G T C G T A A C T G C G A T G T A C A C G T A T C G T G C A C T A G A C T G A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T