Information for 2-TGRCACAATTSCT (Motif 9)

A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G T A C G T A C G A T A C G T A C T G A C G T C A T G A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.8 +/- 16.3bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGRCACAATTSCT-
CTCACACAATGGCGC
 A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGRCACAATTSCT--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGRCACAATTSCT-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGRCACAATTSCT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PH0009.1_Bsx/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGRCACAATTSCT--
NTNAGNTAATTACCTN
 A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGRCACAATTSCT
-RNAACAATGG--
 A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGRCACAATTSCT
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGRCACAATTSCT-
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGRCACAATTSCT
---GACAATGNN-
 A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGRCACAATTSCT--
CTGANNTAATTATNNN
 A C G T A C G T A C T G C T A G G A T C C G T A A G T C G T C A C G T A A C G T A C G T A T C G A G T C A C G T A C G T A C G T
T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C