Information for 5-GCWGGTGCCCATCAGG (Motif 5)

A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G
Reverse Opposite:
A G T C T G A C C G A T A T C G G T C A A C G T A T C G A C T G C T A G T A G C G T C A T A G C A T G C C G T A A T C G G T A C
p-value:1e-11
log p-value:-2.724e+01
Information Content per bp:1.689
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif62.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets62.0 +/- 26.0bp
Average Position of motif in Background54.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCWGGTGCCCATCAGG
GGGTGTGCCCAAAAGG
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCWGGTGCCCATCAGG
-GTGGGCCCCA-----
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCWGGTGCCCATCAGG---
-------CACAGCAGGGGG
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCWGGTGCCCATCAGG-----
------DCHCAGCAGGRGGCC
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCWGGTGCCCATCAGG
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T A C G T A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCWGGTGCCCATCAGG
SDGCAGGTGCNS------
 A C G T A C G T A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCWGGTGCCCATCAGG---
----CCACACAGCAGGAGA
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCWGGTGCCCATCAGG---
----GAGCACAGCAGGACA
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCWGGTGCCCATCAGG----
---CCNNACCATCTGGCCTN
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCWGGTGCCCATCAGG
----ATGCCCACC---
 A C T G A T G C G C A T A T C G A C T G A C G T A T C G A G T C G T A C A T G C G T C A A C G T A T G C G C T A A C T G C T A G
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T