Information for 14-AGGCCTCAAAAGTTAA (Motif 28)

C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
Reverse Opposite:
A C G T A C G T C T G A T G C A A G T C G A C T A C G T A G C T A C G T A C T G C G T A C T A G A C T G A T G C A T G C A C G T
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.798
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 10.7bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA
-------AAAAGTCAA
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA-
AAAGGTCAAAGGTCAAC
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA
-GGGGTCAAAGGTCA-
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA---
---TCTCAAAGGTCACGAG
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA
-GGGGTCAAAGGTCA-
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA
-GGGGTCAAAGGTCA-
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA
------CAAAGGTCAG
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA---
---TCTCAAAGGTCACCTG
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGGCCTCAAAAGTTAA---
------CAAAGGTCAAGGG
 C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTCAAAAGTTAA
CNAGGCCT----------
 A C G T A C G T C G T A A T C G A T C G A G T C A G T C C G A T A G T C C G T A C T G A G T C A C T G A A C T G A C G T A G C T C G T A T C G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T