Information for 10-GTAGAGAGGGAGATCA (Motif 21)

A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
Reverse Opposite:
C G A T A C T G C G T A A G C T A G T C A C G T A G T C G T A C A G T C A C G T A G T C A C G T A T G C A C G T C G T A G T A C
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.4 +/- 7.8bp
Average Position of motif in Background50.6 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA::RXRA/MA0159.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTAGAGAGGGAGATCA
AGGTCACGGAGAGGTCA
 A C G T A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA
---GGGCGGGAAGG--
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTAGAGAGGGAGATCA
TGCGGAGTGGGACTGG-
 A C G T A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA-
--AGATGKDGAGATAAG
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A A C G T
A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA
----GGCGGGAARN--
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA
--------AGRGGTCA
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA--
---NAGATWNBNATCTNN
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA
BTBRAGTGSN------
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.49
Offset:9
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA-
---------AAGGTCAC
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GTAGAGAGGGAGATCA-----
----TGAGGGGGATTAACTAT
 A C T G C G A T C G T A A T C G C G T A A C T G C G T A C T A G A C T G A C T G C G T A A C T G T C G A A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T