Information for 7-GGCATGCGGAGTG (Motif 20)

A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G A T A G T C A G T C T A C G A G T C C G T A A C G T A C T G A T G C A G T C
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.6 +/- 17.9bp
Average Position of motif in Background56.7 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCATGCGGAGTG
--CCTGCTGAGH-
 A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCGGAGTG-
TNTCCTGCTGTGNNG
 A C G T A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCGGAGTG-
TCNCCTGCTGNGNNN
 A C G T A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGCATGCGGAGTG--
----TGTGGATTNNN
 A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGCATGCGGAGTG----
-----GTGGCGTGACNG
 A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GGCATGCGGAGTG---
------TTRAGTGSYK
 A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGCATGCGGAGTG-
--NNTGTGGATTSS
 A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCGGAGTG-
NNTCCTGCTGTGNNN
 A C G T A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCGGAGTG
GCGCATGCGCAG--
 A C G T A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCATGCGGAGTG--
----GGGGGCGTGGN
 A C T G A T C G A G T C T C G A A C G T A C T G A G T C A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C