Information for 6-RATTRCTSKGGTM (Motif 19)

C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
Reverse Opposite:
A C G T C G T A A G T C A G T C G T C A T A C G C G T A A C T G A G T C C G T A C G T A A C G T A G T C
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 21.0bp
Average Position of motif in Background78.1 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:RATTRCTSKGGTM-
----GCTGTGGTTT
 C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RATTRCTSKGGTM--
-----CTGTGGTTTN
 C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RATTRCTSKGGTM--
---NNHTGTGGTTWN
 C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RATTRCTSKGGTM
NNCGTTGCTATGGNN
 A C G T A C G T C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RATTRCTSKGGTM-
---GTCTGTGGTTT
 C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PH0007.1_Barx1/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------RATTRCTSKGGTM
ATNNACTAATTACTTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------RATTRCTSKGGTM
ANNCATTAATTGCTNGN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------RATTRCTSKGGTM
ANNCATTAATTGCTNGN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------RATTRCTSKGGTM
NANNGNTAATTACCNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RATTRCTSKGGTM
AAAATTGTTATGAA-
 A C G T A C G T C T A G C G T A A C G T A C G T C T A G G T A C A C G T A T C G A C G T A C T G A C T G A C G T G T C A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T