Information for 3-AGGGACAGCTTYC (Motif 15)

C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A T G C A C G T A A C T G A G T C G C A T A C T G A G C T A G T C A G T C A G T C C G A T
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.795
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.8 +/- 32.7bp
Average Position of motif in Background42.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF1/MA0796.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGGGACAGCTTYC-
--TGACAGCTGTCA
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C A C G T
A C G T A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGGACAGCTTYC
NGNGACAGCTGCN
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGGACAGCTTYC-
--TGACAGCTGTCA
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C A C G T
A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGGACAGCTTYC
-NNAGCAGCTGCT
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGGGACAGCTTYC-
--TGACAGGTGTCA
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C A C G T
A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGGACAGCTTYC
--BAACAGCTGT-
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C
A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGGACAGCTTYC-
---GACAGCTGCAG
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGGACAGCTTYC
---AACAGCTG--
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGGACAGCTTYC-
---AACAGCTGCAG
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGGACAGCTTYC-
--TGACAGGTGTCA
 C G T A C T A G C T A G A C T G C T G A T G A C C G T A A C T G A G T C A C G T A C G T A G C T A G T C A C G T
A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A