Information for 3-TCCCTCATGG (Motif 10)

G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G
Reverse Opposite:
A G T C T A G C C T G A C G A T T C A G T G C A A T C G C T A G C T A G C G T A
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.814
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif245.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets50.3 +/- 23.0bp
Average Position of motif in Background49.5 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTCATGG
TACCCGCATN-
 A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCCTCATGG---
-GCCTCAGGGCAT
 G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCCCTCATGG--
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCATGG
GTACCCGCATN-
 A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCCTCATGG---
-SCCTSAGGSCAW
 G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTCATGG
NCTTCCCGCCC--
 A C G T A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCCCTCATGG---
ATTCCCTGAGGGGAA
 A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCCCTCATGG
GYCATCMATCAT--
 A C G T A C G T A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTCATGG
NYTTCCCGCC---
 A C G T A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCATGG---
NTCGCCTCAGGCAAT
 A C G T A C G T G C A T A G T C A G T C T A G C A C G T A G T C C G T A G A C T A T C G T C A G A C G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T