Information for 7-AAGVHCAAATTGTTTA (Motif 8)

G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C G T A A T G C C G T A C T G A A C G T A C G T C G A T C T A G C G T A A C T G A G T C C G A T A C G T
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 29.8bp
Average Position of motif in Background61.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.73
Offset:8
Orientation:reverse strand
Alignment:AAGVHCAAATTGTTTA-
--------ATTGTTTAN
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.73
Offset:7
Orientation:forward strand
Alignment:AAGVHCAAATTGTTTA--
-------TATTGTTTATT
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.72
Offset:8
Orientation:forward strand
Alignment:AAGVHCAAATTGTTTA
--------ATTGTTA-
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.69
Offset:9
Orientation:reverse strand
Alignment:AAGVHCAAATTGTTTA-
---------TTGTTTAC
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAGVHCAAATTGTTTA-
--NNATNAATTGTTTNN
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T
A C G T A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAGVHCAAATTGTTTA---
--GGAAAAATTGTTAGGAA
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AAGVHCAAATTGTTTA----
----TTCAATTGTTCTAAAA
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.68
Offset:9
Orientation:reverse strand
Alignment:AAGVHCAAATTGTTTA-
---------TTGTTTAC
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.67
Offset:5
Orientation:forward strand
Alignment:AAGVHCAAATTGTTTA---
-----AAAATTGTTATGAA
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.67
Offset:8
Orientation:reverse strand
Alignment:AAGVHCAAATTGTTTA------
--------NTTGTTTACGTTNN
 G T C A C G T A A C T G T A G C G A C T G A T C C G T A G T C A C G T A G A C T C G A T T A C G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G