Information for 4-TCTKRTTTCCCTBCSG (Motif 7)

A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
Reverse Opposite:
G T A C A T C G A C T G T A C G C T G A C T A G C T A G A C T G C T G A C G T A C T G A A G T C G T C A G T C A A C T G C T G A
p-value:1e-10
log p-value:-2.404e+01
Information Content per bp:1.720
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 27.4bp
Average Position of motif in Background38.2 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCTKRTTTCCCTBCSG
GKMTCADRTTWC-------
 A C G T A C G T A C G T A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCTKRTTTCCCTBCSG
GKVTCADRTTWC-------
 A C G T A C G T A C G T A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCTKRTTTCCCTBCSG
----GTTTCACTTCCG
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCTKRTTTCCCTBCSG
CCGTCTTCCCCCTCAC
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTKRTTTCCCTBCSG
-----TTCCTCT----
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTKRTTTCCCTBCSG
--TGGTTTCAGT----
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTKRTTTCCCTBCSG
---ATTTTCCATT---
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTKRTTTCCCTBCSG
---ATTTTCCATT---
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCTKRTTTCCCTBCSG
--CAGTTTCGNTTCTN
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCTKRTTTCCCTBCSG
---ATTTTCCATT---
 A G C T A G T C A C G T A C G T T C A G A G C T A C G T A G C T A G T C A G T C A G T C A G C T A G T C T A G C T A G C A C T G
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T