Information for 15-GAGCGACGTG (Motif 25)

A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G A C G T A G T C A C T G A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.259e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 32.3bp
Average Position of motif in Background44.2 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GAGCGACGTG-
--GCCACGTGT
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAGCGACGTG-
---GGACGTGC
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAGCGACGTG-
-GGGTACGTGC
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAGCGACGTG
--GCCACGTG
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGCGACGTG-----
TGGGCGACGTCGTTAA
 A C G T A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAGCGACGTG
--NCCACGTG
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GAGCGACGTG--
----TACGTGCV
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GAGCGACGTG-
---RTACGTGC
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGCGACGTG--
--GACACGTGCC
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGCGACGTG-
-NNCCACGTGG
 A C T G C G T A A C T G A G T C A C T G C G T A A G T C A C T G A C G T A C T G A C G T
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G