Information for 11-GGGACCTCACAGGGCC (Motif 17)

A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C A T G C A G T C A G C T A C T G A C G T A T C G C G T A A C T G A C T G A C G T G T A C A G T C A G T C
p-value:1e-7
log p-value:-1.757e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 12.3bp
Average Position of motif in Background50.7 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGACCTCACAGGGCC
-GGACCACCCACG---
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGACCTCACAGGGCC
---ACWTCAAAGG---
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGACCTCACAGGGCC
-TGWCCTCARNTGACC
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGACCTCACAGGGCC
GCGACCACACTG----
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGGACCTCACAGGGCC
-------CACAGN---
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGACCTCACAGGGCC
GTGACGTCACCG----
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGACCTCACAGGGCC
---ACATCAAAGG---
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGACCTCACAGGGCC
---ACATCAAAGGNA-
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGACCTCACAGGGCC
-AAAGATCAAAGGAA-
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GGGACCTCACAGGGCC
-----TTGACAGC---
 A C T G A C T G C A T G C G T A A G T C A G T C A C G T A T G C C G T A A G T C C T G A A C T G A T C G A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T