Information for 2-CCCCMRGTGGTACTGT (Motif 3)

A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
Reverse Opposite:
C T G A T A G C C G T A A T C G A C G T C T G A A G T C G T A C C T G A A G T C G A T C C A G T A C T G C A T G C T A G A C T G
p-value:1e-12
log p-value:-2.943e+01
Information Content per bp:1.731
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 25.9bp
Average Position of motif in Background78.1 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCCMRGTGGTACTGT-
NNANTGGTGGTCTTNNN
 A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCCMRGTGGTACTGT
CCCCCCCGGGGGNN----
 A C G T A C G T A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCMRGTGGTACTGT
NCCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCMRGTGGTACTGT
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.55
Offset:-9
Orientation:forward strand
Alignment:---------CCCCMRGTGGTACTGT
CNNBRGCGCCCCCTGSTGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCCMRGTGGTACTGT----
----TNNTGCTACTGTNNNN
 A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCCMRGTGGTACTGT----
----CNNNGCTACTGTANNN
 A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CCCCMRGTGGTACTGT
TAGCGCCCCCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCCMRGTGGTACTGT
-AACAGGTGNT-----
 A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CCCCMRGTGGTACTGT
ANAGTGCCACCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C G T A C G T C A C T A G C T A G A G C T A C T G C T A G A G C T G T C A A T G C A C G T A C T G A G C T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T