Information for 11-CAGACTGGGCTCG (Motif 19)

A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
Reverse Opposite:
G T A C A C T G C G T A A C T G G T A C A T G C A G T C G T C A A C T G C A G T A G T C A G C T A C T G
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.923
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.1 +/- 30.0bp
Average Position of motif in Background58.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGACTGGGCTCG
-WDNCTGGGCA--
 A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTGGGCTCG
CCAGACAG------
 A C G T A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTGGGCTCG
CCAGACRSVB----
 A C G T A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTGGGCTCG
BCAGACWA------
 A C G T A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGACTGGGCTCG-
ATGCCCGGGCATGT
 A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGACTGGGCTCG
--GCTCGGSCTC-
 A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CAGACTGGGCTCG
-------NGCTN-
 A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGACTGGGCTCG----
CGAACAGTGCTCACTAT
 A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CAGACTGGGCTCG--
-------GGCGCGCT
 A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAGACTGGGCTCG
AGNACAGNCTGTTCTN-
 A C G T A C G T A C G T A C G T A G T C C T G A A C T G G T C A A G T C A C G T A C T G A T C G A C T G A G T C A C G T A G T C A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T