Information for 9-GTGCTGTCTGCTG (Motif 18)

A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C G T C A C T A G C T G A A T G C C G T A A C T G A G T C C T G A T G A C
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.815
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets55.1 +/- 24.5bp
Average Position of motif in Background57.5 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGTCTGCTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGCTGTCTGCTG--
---CCCCCTGCTGTG
 A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GTGCTGTCTGCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTGTCTGCTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGCTGTCTGCTG---
-GGCCYCCTGCTGDGH
 A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGTCTGCTG
AATTTGCTGAC-----
 A C G T A C G T A C G T A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGCTGTCTGCTG
-TGCTGACTCA--
 A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGTCTGCTG--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGTCTGCTG
AAAATGCTGACT----
 A C G T A C G T A C G T A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGCTGTCTGCTG
-NGCTN-------
 A C T G A G C T A C T G A G T C C G A T A T C G G A C T A G T C A C G T A C T G A T G C A C G T A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T