Information for 2-CTGCGTGAGG (Motif 15)

A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G
Reverse Opposite:
A T G C A T G C A G C T A G T C T C G A A G T C C A T G A G T C C T G A T A C G
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.650
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif12.67%
Number of Background Sequences with motif3291.5
Percentage of Background Sequences with motif6.97%
Average Position of motif in Targets46.1 +/- 24.5bp
Average Position of motif in Background50.2 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGCGTGAGG
-TGCGTG---
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGCGTGAGG
TTGCGTGCVA
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGAGG--
-NGCCTGAGGCN
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGAGG--
-TGCCTGAGGCN
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGAGG--
-NGCCTNAGGCN
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGAGG-
-TGGGTGTGGC
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGCGTGAGG
--NCGTGACN
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCGTGAGG--
NTGGGTGTGGCC
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGCGTGAGG----
ATTGCCTGAGGCAAT
 A C G T A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGAGG--
-TGCGTGGGCGT
 A T G C G A C T T C A G G T A C T C A G A G C T A C T G T C G A T A C G T A C G A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T