Information for 5-AACAAGCCAC (Motif 9)

C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G A G T C A G C T A C G T T A C G C G A T C G A T
p-value:1e-12
log p-value:-2.786e+01
Information Content per bp:1.843
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif106.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets43.2 +/- 29.7bp
Average Position of motif in Background46.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACAAGCCAC
CNGTCACGCCAC
 A C G T A C G T C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AACAAGCCAC----
---AAACCACAGAN
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AACAAGCCAC---
---AAACCACANN
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACAAGCCAC
ATCACCCCAT
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AACAAGCCAC
----ATCCAC
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AACAAGCCAC----
--NWAACCACADNN
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AACAAGCCAC--
--NAAACCACAG
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C A C G T A C G T
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACAAGCCAC---
-SSAATCCACANN
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACAAGCCAC
ATCACCCCAT
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACAAGCCAC-
TCCAATCCACA
 C G T A C G T A A T G C C G T A T C G A C T A G A G T C G T A C C G T A A T G C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A