Information for 9-CAAAGAGCTT (Motif 14)

A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G A G T C C A G T A G T C A C G T A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.931
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif49.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.9 +/- 30.3bp
Average Position of motif in Background47.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAAAGAGCTT
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAGCTT-
ACAAAGGNBCCT
 A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGAGCTT
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGAGCTT
GGAACAAAGR----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAGCTT
ACAAAG-----
 A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAAGAGCTT
TTAAGTGCTT
 A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CAAAGAGCTT
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CAAAGAGCTT
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAAGAGCTT-----
TACTAAGTACTTAAATG
 A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGAGCTT
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G G T C A A C T G A G T C A C G T A G C T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T