Information for 4-TTGTCAAGACTTTTCT (Motif 9)

A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C G T A A C T G A G C T A G T C C G A T C G A T A C T G C G T A A T G C C G T A G T C A
p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 20.4bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGTCAAGACTTTTCT-
-TTTTACGACTTTCCAT
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGTCAAGACTTTTCT
-TGTCTAGACG-----
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTGTCAAGACTTTTCT-
--TTCTAGAABNTTCTA
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGTCAAGACTTTTCT
-AGGGAAGTCATTTCT
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGTCAAGACTTTTCT
--TTCTAGAACGTTC-
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
A C G T A C G T C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTGTCAAGACTTTTCT
-----TTGACTTTT--
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTGTCAAGACTTTTCT
NTGTCAN---------
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCAAGACTTTTCT
CCTGTCAA---------
 A C G T A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTGTCAAGACTTTTCT
YTGWCADY--------
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTGTCAAGACTTTTCT
--TTCTAGAACGTTC-
 A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T
A C G T A C G T C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T