Information for 6-GSSAGMAKKWCTA (Motif 7)

A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G A T G T A C G T C A A C G T A C T G A T G C A C G T A T C G A T C G A G T C
p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 22.5bp
Average Position of motif in Background31.7 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GSSAGMAKKWCTA-----
---ACCGTGACTAATTNN
 A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GSSAGMAKKWCTA
AAGTCAGCANTTTTN
 A C G T A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GSSAGMAKKWCTA
GGGAGGACNG---
 A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GSSAGMAKKWCTA
NCTANGTCAGCAAATTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GSSAGMAKKWCTA
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GSSAGMAKKWCTA
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GSSAGMAKKWCTA
NGTCAGCANTTT--
 A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GSSAGMAKKWCTA
TGGCACCATGCCAA
 A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GSSAGMAKKWCTA
GTCAGCANNTN--
 A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GSSAGMAKKWCTA
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T