Information for 4-AGGTGCASCCTCGGCT (Motif 4)

T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
Reverse Opposite:
C T G A A T C G A G T C A G T C A C T G C T G A A C T G T C A G A T C G G A C T A T C G A G T C T C G A A G T C A G T C A G C T
p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 15.0bp
Average Position of motif in Background62.9 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGCASCCTCGGCT
NNNGGGGCGCCCCCNN--
 A C G T A C G T T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGGTGCASCCTCGGCT--
---ACCACTCTCGGTCAC
 T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGGTGCASCCTCGGCT
AGGGGAATCCCCT---
 T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGGTGCASCCTCGGCT--
---AGTATTCTCGGTTGC
 T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGGTGCASCCTCGGCT
AGGGGAATCCCCT---
 T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGCASCCTCGGCT
ANCGCGCGCCCTTNN--
 A C G T T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCASCCTCGGCT
NNCAGGTGCG---------
 A C G T A C G T A C G T T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGGTGCASCCTCGGCT
ATCCACAGGTGCGAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGCASCCTCGGCT
SDGCAGGTGCNS--------
 A C G T A C G T A C G T A C G T T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCASCCTCGGCT
GACAGGTGTN---------
 A C G T A C G T A C G T T C G A A C T G A C T G A G C T A C T G A T G C C G T A A T G C A G T C A G T C A G C T A G T C A C T G A C T G A T G C A G C T
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T