Information for 14-GCACCCCGGTCAC (Motif 26)

A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G A C T G A C G T A T C G A G T C
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 23.3bp
Average Position of motif in Background32.2 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCACCCCGGTCAC---
CGCGCCGGGTCACGTA
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCACCCCGGTCAC----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCACCCCGGTCAC----
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCACCCCGGTCAC
------AGGTCA-
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCACCCCGGTCAC
--ATCAAGGTCA-
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCACCCCGGTCAC----
-----CCGGTCACGTGA
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCACCCCGGTCAC
--AAYTAGGTCA-
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCACCCCGGTCAC
TGACACCTGTCA-
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCACCCCGGTCAC--
-------AGTCACGC
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCACCCCGGTCAC---
AGAGCGGGGTCAAGTA
 A C T G A T G C C G T A A G T C A G T C A G T C A G T C A C T G C T A G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A