Information for 13-CTTTGCTGCCTGC (Motif 24)

A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G T C C G T A T G C A C T G A A C T G
p-value:1e-6
log p-value:-1.603e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.7 +/- 25.4bp
Average Position of motif in Background60.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTTTGCTGCCTGC--
-CTGGCAGNCTGCCA
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTTGCTGCCTGC
--TTCCCGCCWG-
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTTGCTGCCTGC---
ACTTGCTACCTACACC
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTTTGCTGCCTGC
---TGCTGACTCA
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTTTGCTGCCTGC--
-TTGGCATGGTGCCA
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTTTGCTGCCTGC-----
---GGCCYCCTGCTGDGH
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTTGCTGCCTGC---
ACATGCTACCTAATAC
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTTTGCTGCCTGC
-----CTGTCTGG
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTTTGCTGCCTGC
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTTGCTGCCTGC
DTTTCCCGCC---
 A G T C A G C T A C G T A C G T A C T G A G T C G C A T A C T G A G T C A G T C A C G T A C T G A G T C
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T