Information for 2-ACGTGAGGGTCTGAGT (Motif 2)

C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C G C A T A G T C T C G A A C T G C G T A A G T C A G T C A G T C A G C T A G T C C G T A A G T C A C T G A C G T
p-value:1e-13
log p-value:-3.125e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 27.0bp
Average Position of motif in Background35.5 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGAGGGTCTGAGT
GGGTACGTGC----------
 A C G T A C G T A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACGTGAGGGTCTGAGT
CACGTG-----------
 A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACGTGAGGGTCTGAGT
GCACGTGA----------
 A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACGTGAGGGTCTGAGT
RTACGTGC----------
 A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACGTGAGGGTCTGAGT
GGACGTGC----------
 A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACGTGAGGGTCTGAGT
---NRRGGGTCTT---
 C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACGTGAGGGTCTGAGT
TACGTGCV---------
 A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACGTGAGGGTCTGAGT
NVCACGTG-----------
 A C G T A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACGTGAGGGTCTGAGT
GGTCACGTGA----------
 A C G T A C G T A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGAGGGTCTGAGT
NCACGTGACN--------
 A C G T A C G T C G T A A G T C T C A G A C G T A C T G C T G A C T A G A C T G A C T G C G A T A G T C A G C T A C T G C G T A A C T G A C G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T